Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Dchs1E9PVD3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Dchs1E9PVD3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Dchs1E9PVD3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Dchs1E9PVD3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Dchs1E9PVD3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Dchs1E9PVD3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.08■□□□□ 0
Dchs1E9PVD3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.08■□□□□ 0
Dchs1E9PVD3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.08■□□□□ 0
Dchs1E9PVD3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Dchs1E9PVD3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Dchs1E9PVD3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44357-201ENSMUST00000195897 142 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm19658-201ENSMUST00000196231 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44367-201ENSMUST00000196836 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44350-201ENSMUST00000197197 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44390-201ENSMUST00000197533 144 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44313-201ENSMUST00000198018 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44486-201ENSMUST00000198508 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44314-201ENSMUST00000199263 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44394-201ENSMUST00000199558 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44484-201ENSMUST00000199873 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44466-201ENSMUST00000200264 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm44359-201ENSMUST00000200671 138 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.07■□□□□ 0
Dchs1E9PVD3 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.07■□□□□ 0
Dchs1E9PVD3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Dchs1E9PVD3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Dchs1E9PVD3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Dchs1E9PVD3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.06■□□□□ 0
Dchs1E9PVD3 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.06■□□□□ 0
Dchs1E9PVD3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Dchs1E9PVD3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.06■□□□□ 0
Dchs1E9PVD3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Dchs1E9PVD3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.06■□□□□ 0
Dchs1E9PVD3 Gm14057-201ENSMUST00000120631 482 ntBASIC15.06■□□□□ 0
Dchs1E9PVD3 Gm1401-201ENSMUST00000122048 772 ntBASIC15.06■□□□□ 0
Dchs1E9PVD3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms