Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm28043E0CXC2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28043E0CXC2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.12■□□□□ 0.33
Gm28043E0CXC2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28043E0CXC2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Haglr-201ENSMUST00000100000 2085 ntBASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.11■□□□□ 0.33
Gm28043E0CXC2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28043E0CXC2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28043E0CXC2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm28043E0CXC2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms