Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Gm5640A3KG49 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5640A3KG49 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5640A3KG49 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.33■□□□□ 0.37
Gm5640A3KG49 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.33■□□□□ 0.37
Gm5640A3KG49 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm5640A3KG49 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Gm5640A3KG49 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm5640A3KG49 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.32■□□□□ 0.36
Gm5640A3KG49 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Gm38285-201ENSMUST00000192928 922 ntBASIC17.32■□□□□ 0.36
Gm5640A3KG49 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.32■□□□□ 0.36
Gm5640A3KG49 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5640A3KG49 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5640A3KG49 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms