Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.87□□□□□ -0.19
Chd6A3KFM7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Mir8117-201ENSMUST00000184773 107 ntBASIC13.87□□□□□ -0.19
Chd6A3KFM7 AV026068-213ENSMUST00000223675 1171 ntBASIC13.87□□□□□ -0.19
Chd6A3KFM7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.87□□□□□ -0.19
Chd6A3KFM7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chd6A3KFM7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.86□□□□□ -0.19
Chd6A3KFM7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Gm13418-201ENSMUST00000119097 944 ntBASIC13.86□□□□□ -0.19
Chd6A3KFM7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chd6A3KFM7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Chd6A3KFM7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chd6A3KFM7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.84□□□□□ -0.19
Chd6A3KFM7 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.84□□□□□ -0.19
Chd6A3KFM7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.84□□□□□ -0.19
Chd6A3KFM7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms