Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Scn1aA2APX8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn1aA2APX8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.89■□□□□ 0.46
Scn1aA2APX8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.89■□□□□ 0.46
Scn1aA2APX8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn1aA2APX8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Scn1aA2APX8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.89■□□□□ 0.45
Scn1aA2APX8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.89■□□□□ 0.45
Scn1aA2APX8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Mir770-201ENSMUST00000103252 94 ntBASIC17.89■□□□□ 0.45
Scn1aA2APX8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn1aA2APX8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scn1aA2APX8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.88■□□□□ 0.45
Scn1aA2APX8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Gm29518-201ENSMUST00000190858 372 ntBASIC17.88■□□□□ 0.45
Scn1aA2APX8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.88■□□□□ 0.45
Scn1aA2APX8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn1aA2APX8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn1aA2APX8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.86■□□□□ 0.45
Scn1aA2APX8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Gm44450-201ENSMUST00000199528 114 ntBASIC17.86■□□□□ 0.45
Scn1aA2APX8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.86■□□□□ 0.45
Scn1aA2APX8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn1aA2APX8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.85■□□□□ 0.45
Scn1aA2APX8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.85■□□□□ 0.45
Scn1aA2APX8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.85■□□□□ 0.45
Scn1aA2APX8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn1aA2APX8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Scn1aA2APX8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.84■□□□□ 0.45
Scn1aA2APX8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn1aA2APX8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.84■□□□□ 0.45
Scn1aA2APX8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms