Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-1A0N8R1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Gm12896-201ENSMUST00000118430 226 ntBASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-1A0N8R1 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Gm13158-201ENSMUST00000122007 736 ntBASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Gm37179-201ENSMUST00000194862 823 ntBASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Gm18025-201ENSMUST00000221733 862 ntBASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-1A0N8R1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Gm4974-201ENSMUST00000209974 875 ntBASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12-1A0N8R1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-1A0N8R1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms