Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 Gm10812-201ENSMUST00000099864 546 ntBASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lnp1A0A1B0GSK3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lnp1A0A1B0GSK3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lnp1A0A1B0GSK3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lnp1A0A1B0GSK3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lnp1A0A1B0GSK3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm715-201ENSMUST00000117865 831 ntBASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lnp1A0A1B0GSK3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lnp1A0A1B0GSK3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms