Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trbv17A0A140T8P8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trbv17A0A140T8P8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trbv17A0A140T8P8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trbv17A0A140T8P8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trbv17A0A140T8P8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trbv17A0A140T8P8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trbv17A0A140T8P8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trbv17A0A140T8P8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Gm10517-202ENSMUST00000192970 758 ntBASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trbv17A0A140T8P8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms