Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv30A0A0B4J1P1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm5417-201ENSMUST00000079706 384 ntBASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trbv30A0A0B4J1P1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm37055-201ENSMUST00000191866 133 ntBASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm21814-202ENSMUST00000203277 873 ntBASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.86□□□□□ -0.35
Trbv30A0A0B4J1P1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm27463-201ENSMUST00000183569 57 ntBASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Gm3375-201ENSMUST00000203929 796 ntBASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv30A0A0B4J1P1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms