Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv16A0A0B4J1H3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm12933-201ENSMUST00000120203 872 ntBASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Dio3-201ENSMUST00000097228 1449 ntBASIC12.36□□□□□ -0.43
Trbv16A0A0B4J1H3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.35□□□□□ -0.43
Trbv16A0A0B4J1H3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv16A0A0B4J1H3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms