Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh7A0A0A6YY83 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh7A0A0A6YY83 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh7A0A0A6YY83 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh7A0A0A6YY83 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh7A0A0A6YY83 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.52■□□□□ 0.4
Pcdh7A0A0A6YY83 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh7A0A0A6YY83 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh7A0A0A6YY83 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh7A0A0A6YY83 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.51■□□□□ 0.39
Pcdh7A0A0A6YY83 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh7A0A0A6YY83 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh7A0A0A6YY83 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms