Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Gm11249-201ENSMUST00000117071 859 ntBASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Gm6576-201ENSMUST00000169678 883 ntBASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9d-1A0A075B699 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-1A0A075B699 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Gm11643-201ENSMUST00000119578 864 ntBASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Gm27275-201ENSMUST00000184318 272 ntBASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9d-1A0A075B699 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-1A0A075B699 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms