Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm12441-201ENSMUST00000121806 588 ntBASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Gm6576-201ENSMUST00000169678 883 ntBASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5-4A0A075B652 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5-4A0A075B652 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Gm20049-201ENSMUST00000219950 730 ntBASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5-4A0A075B652 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-4A0A075B652 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-4A0A075B652 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav5-4A0A075B652 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms