Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mtag2-201ENSMUST00000058665 714 ntBASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-4-dv10A0A075B651 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm10849-201ENSMUST00000100397 618 ntBASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm15375-201ENSMUST00000119510 849 ntBASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm5408-201ENSMUST00000197998 747 ntBASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-4-dv10A0A075B651 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-4-dv10A0A075B651 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-4-dv10A0A075B651 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms