Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav8-1A0A075B641 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Gm43137-201ENSMUST00000198052 594 ntBASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav8-1A0A075B641 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav8-1A0A075B641 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav8-1A0A075B641 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms