Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-7-dv9A0A075B639 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm10653-202ENSMUST00000139570 835 ntBASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm29257-201ENSMUST00000186115 639 ntBASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-7-dv9A0A075B639 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-7-dv9A0A075B639 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-7-dv9A0A075B639 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-7-dv9A0A075B639 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-7-dv9A0A075B639 Gm13168-201ENSMUST00000121771 632 ntBASIC15.08■□□□□ 0
Trav6-7-dv9A0A075B639 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms