Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Gm14117-201ENSMUST00000122417 843 ntBASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7n-4A0A075B620 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7n-4A0A075B620 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7n-4A0A075B620 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7n-4A0A075B620 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7n-4A0A075B620 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7n-4A0A075B620 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms