Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-1A0A075B5Z8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Dancr-204ENSMUST00000132389 2347 ntBASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm10849-201ENSMUST00000100397 618 ntBASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm15375-201ENSMUST00000119510 849 ntBASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-1A0A075B5Z8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-1A0A075B5Z8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-1A0A075B5Z8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm13148-201ENSMUST00000118892 745 ntBASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6-1A0A075B5Z8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6-1A0A075B5Z8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms