Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL6P24-201ENST00000445338 864 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 OR52Y1P-201ENST00000452418 828 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC022415.1-202ENST00000486612 523 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 GOLGA5P1-201ENST00000507317 980 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC021820.1-201ENST00000525564 808 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 TRAV11-201ENST00000539512 339 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AL132640.1-201ENST00000559594 619 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AL360012.1-201ENST00000602813 131 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 MIR6731-201ENST00000614863 72 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 AC105235.1-201ENST00000623208 1816 ntBASIC5.71□□□□□ -1.5
RFT1Q96AA3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFT1Q96AA3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.71□□□□□ -1.5
RFT1Q96AA3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 MIR187-201ENST00000385062 109 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 MIR301B-201ENST00000390813 78 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 RNA5SP474-201ENST00000391234 90 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 OR52S1P-201ENST00000427016 937 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 OSTCP2-201ENST00000437956 444 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC019185.3-201ENST00000438805 323 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 OR52U1P-201ENST00000439752 923 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 OR52I1-201ENST00000450052 1050 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 OR7L1P-201ENST00000456181 380 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 RN7SL492P-201ENST00000460700 295 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 RN7SL849P-201ENST00000485236 295 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 RNU4-18P-201ENST00000516751 149 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 SNRPCP6-201ENST00000528310 210 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC106785.4-201ENST00000569492 412 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AL157899.1-201ENST00000604110 936 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 MIR6726-201ENST00000613751 61 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC007347.2-201ENST00000623044 180 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC106782.7-201ENST00000624024 418 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC133555.5-201ENST00000624430 418 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 AC017037.4-201ENST00000624526 826 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 MIR665-201ENST00000635949 72 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 HSPD1P1-201ENST00000503199 1726 ntBASIC5.7□□□□□ -1.5
RFT1Q96AA3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFT1Q96AA3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFT1Q96AA3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFT1Q96AA3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RFT1Q96AA3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFT1Q96AA3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.69□□□□□ -1.5
RFT1Q96AA3 AC005261.6-201ENST00000623072 1387 ntBASIC5.69□□□□□ -1.5
RFT1Q96AA3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RFT1Q96AA3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms