Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC022726.2-201ENST00000634673 547 ntBASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 USP9YP3-201ENST00000434481 1766 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AOX3P-204ENST00000491025 2107 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 PPIAP24-201ENST00000328558 471 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RNU1-5P-201ENST00000362684 144 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RNA5SP140-201ENST00000364524 92 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC092634.1-201ENST00000366505 199 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RANP6-201ENST00000413691 644 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC007562.1-201ENST00000421819 517 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RPL23AP85-201ENST00000421838 433 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 BX679664.2-201ENST00000439282 283 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC083855.1-201ENST00000440041 258 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC023274.2-201ENST00000445264 521 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL451063.1-201ENST00000450164 1133 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 NIFKP4-201ENST00000567275 1192 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC090651.1-201ENST00000567865 634 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 RN7SL208P-201ENST00000577964 296 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 MIR4420-201ENST00000583944 77 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 SNORD96A-201ENST00000606577 79 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AC139792.1-201ENST00000607051 647 ntBASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.32□□□□□ -1.56
RTN4IP1Q8WWV3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC010894.1-201ENST00000313760 361 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL121835.1-201ENST00000404250 354 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL589794.1-201ENST00000424971 390 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL390879.1-201ENST00000439143 386 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 HMGN1P32-201ENST00000441744 256 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC092967.1-201ENST00000449016 481 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 NPM1P9-201ENST00000453156 844 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC002075.1-201ENST00000457396 676 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 RPL5P33-201ENST00000487833 905 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 RPL19P11-201ENST00000495944 589 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC009567.2-201ENST00000502989 349 ntBASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.31□□□□□ -1.56
RTN4IP1Q8WWV3 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms