Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 RPL12P48-201ENST00000605620 304 ntBASIC5.71□□□□□ -1.5
COPS3Q9UNS2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC012511.1-201ENST00000608140 449 ntBASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC093635.1-201ENST00000609028 555 ntBASIC5.71□□□□□ -1.5
COPS3Q9UNS2 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC027559.1-201ENST00000636288 271 ntBASIC5.71□□□□□ -1.5
COPS3Q9UNS2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC016745.2-201ENST00000608834 3443 ntBASIC5.71□□□□□ -1.5
COPS3Q9UNS2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.71□□□□□ -1.5
COPS3Q9UNS2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 SAGE3P-201ENST00000619800 1635 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AP005435.3-201ENST00000531260 3198 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AP002512.4-202ENST00000641599 4530 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 NFU1P1-201ENST00000413128 774 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 SERPINA7P1-201ENST00000443077 631 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC103563.5-201ENST00000455643 364 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AF305872.1-201ENST00000485217 471 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC093878.1-201ENST00000515630 432 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 OR4A40P-201ENST00000533878 948 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 OR4H6P-201ENST00000563771 921 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC105036.1-201ENST00000566222 271 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 NIFKP4-201ENST00000567275 1192 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 PPIAP14-201ENST00000577627 496 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 RN7SL208P-201ENST00000577964 296 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 RN7SL131P-201ENST00000579043 256 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC024085.1-201ENST00000604299 432 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AL139041.1-201ENST00000605480 610 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 AC135068.11-201ENST00000636378 921 ntBASIC5.7□□□□□ -1.5
COPS3Q9UNS2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COPS3Q9UNS2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPS3Q9UNS2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms