Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RNA5SP302-201ENST00000364896 100 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RN7SKP81-201ENST00000365603 331 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RN7SKP137-201ENST00000411074 307 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 PRELID1P3-201ENST00000450055 643 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RPS12P20-201ENST00000464109 380 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RN7SL91P-201ENST00000469313 291 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 ADAM3B-201ENST00000569937 840 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC090616.1-201ENST00000583895 447 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 GLYATL1P2-202ENST00000588046 902 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 AL121782.1-201ENST00000611242 413 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 OR2A3P-202ENST00000641249 1776 ntBASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC28BQ9BUN5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 RN7SKP151-201ENST00000410230 316 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC016027.5-201ENST00000427227 210 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 RPL19P11-201ENST00000495944 589 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 LDHBP3-201ENST00000514909 822 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AP005902.2-201ENST00000518393 307 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 CARSP2-201ENST00000520688 277 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 NPM1P42-201ENST00000560329 862 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 MIR378C-201ENST00000578683 81 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 AL008723.3-201ENST00000608926 449 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC28BQ9BUN5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 RN7SKP130-201ENST00000364924 301 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC074375.1-201ENST00000372993 192 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AL391419.1-201ENST00000398901 1275 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AL590635.1-201ENST00000406314 586 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC015977.1-201ENST00000418887 292 ntBASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC28BQ9BUN5 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms