Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC007790.1-201ENST00000439081 782 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC092967.1-201ENST00000449016 481 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AP005902.2-201ENST00000518393 307 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 OR7E158P-201ENST00000524483 910 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 AP001153.1-201ENST00000641024 338 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 MSL3P1-202ENST00000440028 1468 ntBASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC71LQ8N9Z2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC005725.1-201ENST00000577346 2607 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL096800.1-201ENST00000405326 893 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SNX18P13-201ENST00000412442 529 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 MRPS21P5-201ENST00000417885 231 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC027124.1-201ENST00000440852 466 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC079193.1-201ENST00000460497 588 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC099340.1-201ENST00000475247 599 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC137549.1-201ENST00000514243 533 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL132640.2-202ENST00000559732 614 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 MIR378C-201ENST00000578683 81 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC091133.5-201ENST00000603088 301 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL161931.1-201ENST00000612768 246 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC007671.1-201ENST00000616957 830 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 MIR6732-201ENST00000619365 60 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 BX005040.2-201ENST00000620504 370 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AC069234.4-201ENST00000621276 412 ntBASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC71LQ8N9Z2 SAGE3P-201ENST00000619800 1635 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms