Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm43879-201ENSMUST00000203811 3760 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm25090-201ENSMUST00000104000 132 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Mir1188-201ENSMUST00000116756 120 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm15803-201ENSMUST00000120118 394 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm11471-201ENSMUST00000121824 198 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm24056-201ENSMUST00000158617 146 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm27541-201ENSMUST00000184078 122 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm44349-201ENSMUST00000197048 123 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim35Q8C006 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Trim35Q8C006 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.22□□□□□ -1.57
Trim35Q8C006 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
Trim35Q8C006 Gm37742-201ENSMUST00000193263 3979 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim35Q8C006 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.21□□□□□ -1.58
Trim35Q8C006 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm24701-201ENSMUST00000101946 105 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm24988-201ENSMUST00000104460 121 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Mir292-201ENSMUST00000104847 82 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm25680-201ENSMUST00000116917 126 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm22635-201ENSMUST00000116962 126 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm26345-201ENSMUST00000157534 120 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm25846-201ENSMUST00000158013 135 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm25861-201ENSMUST00000158251 109 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm7609-204ENSMUST00000161424 461 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm5139-201ENSMUST00000175943 249 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm22456-201ENSMUST00000082578 125 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Mir188-201ENSMUST00000083464 68 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Trim35Q8C006 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim35Q8C006 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Trim35Q8C006 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.21□□□□□ -1.58
Trim35Q8C006 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim35Q8C006 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm22314-201ENSMUST00000158007 281 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm25771-201ENSMUST00000158565 144 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Mir6343-201ENSMUST00000183584 84 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm27781-201ENSMUST00000185185 92 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Smc5-206ENSMUST00000226111 3265 ntBASIC5.2□□□□□ -1.58
Trim35Q8C006 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim35Q8C006 Gm13136-201ENSMUST00000121031 2950 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim35Q8C006 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim35Q8C006 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm22193-201ENSMUST00000116868 76 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm26100-201ENSMUST00000157245 127 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm22535-201ENSMUST00000158174 119 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm44319-201ENSMUST00000196974 93 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim35Q8C006 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm24805-201ENSMUST00000082931 104 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm23570-201ENSMUST00000083029 104 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.19□□□□□ -1.58
Trim35Q8C006 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim35Q8C006 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim35Q8C006 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim35Q8C006 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms