Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Snord80-202ENSMUST00000199023 77 ntBASIC3.98□□□□□ -1.77
Sox1P53783 Gm17887-201ENSMUST00000200194 547 ntBASIC3.98□□□□□ -1.77
Sox1P53783 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.98□□□□□ -1.77
Sox1P53783 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.98□□□□□ -1.77
Sox1P53783 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sox1P53783 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sox1P53783 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.98□□□□□ -1.77
Sox1P53783 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sox1P53783 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.97□□□□□ -1.77
Sox1P53783 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sox1P53783 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sox1P53783 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sox1P53783 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm11704-201ENSMUST00000120031 214 ntBASIC3.97□□□□□ -1.77
Sox1P53783 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.97□□□□□ -1.77
Sox1P53783 Gm22097-201ENSMUST00000157929 278 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm22968-201ENSMUST00000157955 118 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm27220-201ENSMUST00000183453 262 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm29668-201ENSMUST00000187802 315 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Trbv6-201ENSMUST00000193743 276 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm37431-201ENSMUST00000195102 111 ntBASIC3.97□□□□□ -1.77
Sox1P53783 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.97□□□□□ -1.77
Sox1P53783 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Gm24966-201ENSMUST00000082443 79 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Mir202-201ENSMUST00000083568 72 ntBASIC3.97□□□□□ -1.77
Sox1P53783 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Sox1P53783 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
Sox1P53783 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Sox1P53783 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sox1P53783 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sox1P53783 Mir676-201ENSMUST00000102443 89 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sox1P53783 Gm15714-201ENSMUST00000117168 250 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Gm25447-201ENSMUST00000158997 128 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Gm45013-201ENSMUST00000206883 178 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Sox1P53783 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.96□□□□□ -1.78
Sox1P53783 Gm9370-201ENSMUST00000222787 609 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Gm22297-201ENSMUST00000083312 106 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Mir146-201ENSMUST00000083667 65 ntBASIC3.96□□□□□ -1.78
Sox1P53783 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sox1P53783 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Sox1P53783 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Sox1P53783 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Sox1P53783 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.96□□□□□ -1.78
Sox1P53783 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sox1P53783 Gm25308-201ENSMUST00000104171 158 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm9157-201ENSMUST00000117673 225 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm9119-201ENSMUST00000118866 495 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm25543-201ENSMUST00000122678 312 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm23642-201ENSMUST00000157858 258 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm26001-201ENSMUST00000157989 103 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm6660-201ENSMUST00000179149 468 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm29597-201ENSMUST00000188035 308 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.95□□□□□ -1.78
Sox1P53783 Gm43746-201ENSMUST00000200028 317 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm44563-201ENSMUST00000207958 178 ntBASIC3.95□□□□□ -1.78
Sox1P53783 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Gm9174-201ENSMUST00000078149 255 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Mir384-201ENSMUST00000083565 88 ntBASIC3.95□□□□□ -1.78
Sox1P53783 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Sox1P53783 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Sox1P53783 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sox1P53783 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sox1P53783 Gm24263-201ENSMUST00000104059 107 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm23530-201ENSMUST00000104564 137 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Mir1b-201ENSMUST00000117012 122 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm12304-201ENSMUST00000120312 385 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm16005-201ENSMUST00000120515 269 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.94□□□□□ -1.78
Sox1P53783 Gm23331-201ENSMUST00000157423 108 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm37300-201ENSMUST00000193327 280 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Gm42774-201ENSMUST00000198854 283 ntBASIC3.94□□□□□ -1.78
Sox1P53783 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.94□□□□□ -1.78
Sox1P53783 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Snora70-201ENSMUST00000083047 137 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sox1P53783 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sox1P53783 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.94□□□□□ -1.78
Sox1P53783 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sox1P53783 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sox1P53783 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sox1P53783 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sox1P53783 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Sox1P53783 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms