Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.41□□□□□ -1.38
RPA3P35244 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.41□□□□□ -1.38
RPA3P35244 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.41□□□□□ -1.38
RPA3P35244 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RPA3P35244 RNU1-5P-201ENST00000362684 144 ntBASIC6.41□□□□□ -1.38
RPA3P35244 RNA5SP478-201ENST00000364657 115 ntBASIC6.41□□□□□ -1.38
RPA3P35244 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 OR2W4P-201ENST00000406496 926 ntBASIC6.41□□□□□ -1.38
RPA3P35244 RANP6-201ENST00000413691 644 ntBASIC6.41□□□□□ -1.38
RPA3P35244 UBE2V1P14-201ENST00000415815 558 ntBASIC6.41□□□□□ -1.38
RPA3P35244 RPL23AP85-201ENST00000421838 433 ntBASIC6.41□□□□□ -1.38
RPA3P35244 AL589794.1-201ENST00000424971 390 ntBASIC6.41□□□□□ -1.38
RPA3P35244 WDR82P2-201ENST00000444540 928 ntBASIC6.41□□□□□ -1.38
RPA3P35244 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 AL355032.1-201ENST00000472981 438 ntBASIC6.41□□□□□ -1.38
RPA3P35244 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 AC114728.1-201ENST00000488289 483 ntBASIC6.41□□□□□ -1.38
RPA3P35244 RPL5P14-201ENST00000494197 878 ntBASIC6.41□□□□□ -1.38
RPA3P35244 AC022206.1-201ENST00000495947 347 ntBASIC6.41□□□□□ -1.38
RPA3P35244 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.41□□□□□ -1.38
RPA3P35244 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.41□□□□□ -1.38
RPA3P35244 AC139713.1-202ENST00000512366 460 ntBASIC6.41□□□□□ -1.38
RPA3P35244 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.41□□□□□ -1.38
RPA3P35244 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 AC093635.1-201ENST00000609028 555 ntBASIC6.41□□□□□ -1.38
RPA3P35244 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 PSMC1P6-201ENST00000477233 1319 ntBASIC6.41□□□□□ -1.38
RPA3P35244 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RPA3P35244 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
RPA3P35244 USP9YP3-201ENST00000434481 1766 ntBASIC6.41□□□□□ -1.38
RPA3P35244 AC074141.1-201ENST00000588129 2995 ntBASIC6.41□□□□□ -1.38
RPA3P35244 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RPA3P35244 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RPA3P35244 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RPA3P35244 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RPA3P35244 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RPA3P35244 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.4□□□□□ -1.38
RPA3P35244 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.4□□□□□ -1.38
RPA3P35244 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RPA3P35244 AC010894.1-201ENST00000313760 361 ntBASIC6.4□□□□□ -1.38
RPA3P35244 RNA5SP308-201ENST00000362532 115 ntBASIC6.4□□□□□ -1.38
RPA3P35244 RNA5SP140-201ENST00000364524 92 ntBASIC6.4□□□□□ -1.38
RPA3P35244 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.4□□□□□ -1.38
RPA3P35244 ARSFP1-201ENST00000398758 477 ntBASIC6.4□□□□□ -1.38
RPA3P35244 RPL5P20-201ENST00000403848 896 ntBASIC6.4□□□□□ -1.38
RPA3P35244 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.4□□□□□ -1.38
RPA3P35244 RPS27AP3-201ENST00000453803 454 ntBASIC6.4□□□□□ -1.38
RPA3P35244 RN7SL502P-201ENST00000481857 290 ntBASIC6.4□□□□□ -1.38
RPA3P35244 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.4□□□□□ -1.38
RPA3P35244 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RPA3P35244 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.4□□□□□ -1.38
RPA3P35244 AC113191.1-201ENST00000517759 403 ntBASIC6.4□□□□□ -1.38
RPA3P35244 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.4□□□□□ -1.38
RPA3P35244 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.4□□□□□ -1.38
RPA3P35244 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.4□□□□□ -1.38
RPA3P35244 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RPA3P35244 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.4□□□□□ -1.38
RPA3P35244 AC005519.1-201ENST00000554490 601 ntBASIC6.4□□□□□ -1.38
RPA3P35244 AC090651.1-201ENST00000567865 634 ntBASIC6.4□□□□□ -1.38
RPA3P35244 AC024267.2-201ENST00000582737 417 ntBASIC6.4□□□□□ -1.38
RPA3P35244 MIR5010-201ENST00000582846 120 ntBASIC6.4□□□□□ -1.38
RPA3P35244 AL021368.3-201ENST00000607119 578 ntBASIC6.4□□□□□ -1.38
RPA3P35244 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.4□□□□□ -1.38
RPA3P35244 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
RPA3P35244 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
RPA3P35244 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RPA3P35244 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RPA3P35244 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RPA3P35244 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RPA3P35244 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RPA3P35244 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.4□□□□□ -1.39
RPA3P35244 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
RPA3P35244 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.4□□□□□ -1.39
RPA3P35244 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RPA3P35244 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPA3P35244 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RPA3P35244 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.4□□□□□ -1.39
RPA3P35244 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
RPA3P35244 AC092692.1-201ENST00000623625 2595 ntBASIC6.39□□□□□ -1.39
RPA3P35244 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RPA3P35244 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.39□□□□□ -1.39
RPA3P35244 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RPA3P35244 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RPA3P35244 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RPA3P35244 RPL23AP17-201ENST00000401064 499 ntBASIC6.39□□□□□ -1.39
RPA3P35244 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.39□□□□□ -1.39
RPA3P35244 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.39□□□□□ -1.39
RPA3P35244 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms