Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL139135.1-201ENST00000412675 209 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH13P55290 AHCYP8-201ENST00000425108 209 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AL138479.1-201ENST00000426913 484 ntBASIC6.31□□□□□ -1.4
CDH13P55290 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.31□□□□□ -1.4
CDH13P55290 RPS7P4-201ENST00000444127 582 ntBASIC6.31□□□□□ -1.4
CDH13P55290 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH13P55290 AC090589.1-201ENST00000473109 362 ntBASIC6.31□□□□□ -1.4
CDH13P55290 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH13P55290 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH13P55290 SCARNA5-201ENST00000516201 276 ntBASIC6.31□□□□□ -1.4
CDH13P55290 SUMO2P19-201ENST00000518920 295 ntBASIC6.31□□□□□ -1.4
CDH13P55290 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH13P55290 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.31□□□□□ -1.4
CDH13P55290 PPIAP14-201ENST00000577627 496 ntBASIC6.31□□□□□ -1.4
CDH13P55290 RN7SL208P-201ENST00000577964 296 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH13P55290 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH13P55290 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AC007671.1-201ENST00000616957 830 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AC117503.3-201ENST00000623811 601 ntBASIC6.31□□□□□ -1.4
CDH13P55290 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH13P55290 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH13P55290 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
CDH13P55290 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH13P55290 AP000547.3-204ENST00000588548 2523 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AL137058.3-201ENST00000624531 3099 ntBASIC6.31□□□□□ -1.4
CDH13P55290 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 AC010132.4-201ENST00000569883 1368 ntBASIC6.31□□□□□ -1.4
CDH13P55290 AC119674.1-213ENST00000641177 1386 ntBASIC6.31□□□□□ -1.4
CDH13P55290 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CDH13P55290 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 SAGE3P-201ENST00000619800 1635 ntBASIC6.3□□□□□ -1.4
CDH13P55290 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH13P55290 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH13P55290 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 NPM1P14-201ENST00000343743 866 ntBASIC6.3□□□□□ -1.4
CDH13P55290 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 RNA5SP382-201ENST00000363355 112 ntBASIC6.3□□□□□ -1.4
CDH13P55290 RN7SKP191-201ENST00000364713 306 ntBASIC6.3□□□□□ -1.4
CDH13P55290 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 SNORA70H-201ENST00000383910 135 ntBASIC6.3□□□□□ -1.4
CDH13P55290 SNORA70J-201ENST00000384182 135 ntBASIC6.3□□□□□ -1.4
CDH13P55290 SNORA70.9-201ENST00000384370 135 ntBASIC6.3□□□□□ -1.4
CDH13P55290 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH13P55290 RPL23AP85-201ENST00000421838 433 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AL596268.1-201ENST00000427910 1048 ntBASIC6.3□□□□□ -1.4
CDH13P55290 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 RPL3P11-201ENST00000434028 1146 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AC003989.1-201ENST00000434569 565 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 VN1R38P-201ENST00000450265 887 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 RPL19P11-201ENST00000495944 589 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 AC008868.1-201ENST00000509786 737 ntBASIC6.3□□□□□ -1.4
CDH13P55290 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH13P55290 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.3□□□□□ -1.4
CDH13P55290 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH13P55290 AC011369.2-201ENST00000624423 1567 ntBASIC6.3□□□□□ -1.4
CDH13P55290 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH13P55290 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH13P55290 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CDH13P55290 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms