Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm44084-201ENSMUST00000203947 409 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm10025-201ENSMUST00000079568 372 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm23511-201ENSMUST00000083084 164 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Mir133b-201ENSMUST00000083546 119 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm26327-201ENSMUST00000093724 111 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim35Q8C006 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Trim35Q8C006 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim35Q8C006 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim35Q8C006 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm43047-201ENSMUST00000200089 3460 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm14871-201ENSMUST00000119056 194 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm14709-201ENSMUST00000121225 304 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm15428-201ENSMUST00000121352 333 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm22192-201ENSMUST00000175128 85 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm22852-201ENSMUST00000177899 101 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 AC147545.1-201ENSMUST00000227528 108 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm25632-201ENSMUST00000083112 85 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Trim35Q8C006 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim35Q8C006 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim35Q8C006 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim35Q8C006 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.33□□□□□ -1.56
Trim35Q8C006 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim35Q8C006 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm25919-201ENSMUST00000104271 132 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm25542-201ENSMUST00000116889 94 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm23755-201ENSMUST00000157578 343 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm27396-201ENSMUST00000157708 58 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Mir6370-201ENSMUST00000183510 120 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim35Q8C006 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm23927-201ENSMUST00000082466 215 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.32□□□□□ -1.56
Trim35Q8C006 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.32□□□□□ -1.56
Trim35Q8C006 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim35Q8C006 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim35Q8C006 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm25878-201ENSMUST00000104327 93 ntBASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm24507-201ENSMUST00000157683 134 ntBASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm27446-201ENSMUST00000183963 89 ntBASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm29781-201ENSMUST00000203862 478 ntBASIC5.31□□□□□ -1.56
Trim35Q8C006 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.31□□□□□ -1.56
Trim35Q8C006 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim35Q8C006 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim35Q8C006 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim35Q8C006 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Gm11792-201ENSMUST00000120640 168 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Gm24896-201ENSMUST00000122741 135 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Gm25370-201ENSMUST00000158159 94 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Mir1963-201ENSMUST00000158594 59 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Mir3110-201ENSMUST00000175053 80 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Gm25229-201ENSMUST00000178587 79 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim35Q8C006 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim35Q8C006 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC5.3□□□□□ -1.56
Trim35Q8C006 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim35Q8C006 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 AC153950.1-201ENSMUST00000219916 3238 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm26074-201ENSMUST00000104063 129 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm14816-201ENSMUST00000117174 294 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm6071-201ENSMUST00000119561 440 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm14472-201ENSMUST00000119815 282 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm13246-201ENSMUST00000120994 315 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm16021-201ENSMUST00000121176 219 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm23115-201ENSMUST00000158480 108 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm10087-201ENSMUST00000167650 330 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim35Q8C006 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm24977-201ENSMUST00000083106 163 ntBASIC5.29□□□□□ -1.56
Trim35Q8C006 Gm25513-201ENSMUST00000083861 162 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms