Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm1980-201ENSMUST00000123131 2306 ntBASIC5.38□□□□□ -1.55
Trim35Q8C006 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim35Q8C006 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim35Q8C006 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim35Q8C006 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim35Q8C006 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
Trim35Q8C006 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.38□□□□□ -1.55
Trim35Q8C006 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim35Q8C006 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim35Q8C006 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm25293-201ENSMUST00000122792 285 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm25291-201ENSMUST00000122795 144 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm23233-201ENSMUST00000157301 137 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm24186-201ENSMUST00000157983 127 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Mir7020-201ENSMUST00000183787 70 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm45777-201ENSMUST00000213009 301 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim35Q8C006 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 AC124524.1-201ENSMUST00000225833 181 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim35Q8C006 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Trim35Q8C006 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Trim35Q8C006 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.37□□□□□ -1.55
Trim35Q8C006 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim35Q8C006 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm22677-201ENSMUST00000116977 108 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm11285-201ENSMUST00000118443 322 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm23250-201ENSMUST00000157444 267 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm24216-201ENSMUST00000158259 117 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm7258-201ENSMUST00000179317 300 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim35Q8C006 AL645546.1-201ENSMUST00000225001 189 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm23456-201ENSMUST00000083335 137 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim35Q8C006 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Gm42547-201ENSMUST00000201159 3798 ntBASIC5.36□□□□□ -1.55
Trim35Q8C006 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Trim35Q8C006 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim35Q8C006 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm23750-201ENSMUST00000104222 132 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm23839-201ENSMUST00000116957 109 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm15493-201ENSMUST00000119461 528 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm12074-201ENSMUST00000120189 219 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm22106-201ENSMUST00000122544 127 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm26415-201ENSMUST00000157673 292 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Mir3080-201ENSMUST00000175010 79 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm27754-201ENSMUST00000183340 126 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Mir6377-201ENSMUST00000183760 114 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Mir7687-201ENSMUST00000184722 59 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Trbv25-201ENSMUST00000194700 273 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm43441-201ENSMUST00000201458 205 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm25854-201ENSMUST00000082792 72 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm24525-201ENSMUST00000082917 151 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim35Q8C006 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.35□□□□□ -1.55
Trim35Q8C006 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim35Q8C006 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim35Q8C006 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim35Q8C006 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim35Q8C006 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm25906-201ENSMUST00000158489 126 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm25976-201ENSMUST00000158695 130 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Mir6350-201ENSMUST00000183639 105 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Mir6539-201ENSMUST00000183732 110 ntBASIC5.34□□□□□ -1.55
Trim35Q8C006 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim35Q8C006 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms