Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm38332-201ENSMUST00000194189 147 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm19620-201ENSMUST00000195972 434 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm43739-201ENSMUST00000198294 307 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm43914-201ENSMUST00000203592 594 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm45395-201ENSMUST00000209891 559 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm9318-201ENSMUST00000222444 438 ntBASIC4.04□□□□□ -1.76
Rnf180Q3U827 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Rnf180Q3U827 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rnf180Q3U827 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm24096-201ENSMUST00000103905 110 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm24067-201ENSMUST00000104514 85 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm15180-201ENSMUST00000117745 492 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm12760-201ENSMUST00000117861 482 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm22551-201ENSMUST00000157795 103 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm22651-201ENSMUST00000157872 94 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm28629-201ENSMUST00000187309 263 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm19244-201ENSMUST00000204340 253 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm18453-201ENSMUST00000208000 626 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm39147-201ENSMUST00000211376 465 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm29818-201ENSMUST00000218070 165 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 CT025579.1-201ENSMUST00000223779 366 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm10916-201ENSMUST00000080330 483 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.03□□□□□ -1.76
Rnf180Q3U827 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Rnf180Q3U827 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm16242-201ENSMUST00000117741 334 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm9850-201ENSMUST00000117916 227 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm12311-201ENSMUST00000118803 374 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm14940-201ENSMUST00000119309 495 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm14841-201ENSMUST00000121067 758 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm23262-201ENSMUST00000158323 168 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm25902-201ENSMUST00000158493 318 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm23581-201ENSMUST00000158531 63 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm24976-201ENSMUST00000158972 135 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm8114-201ENSMUST00000172225 484 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm45815-201ENSMUST00000220241 146 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.02□□□□□ -1.77
Rnf180Q3U827 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Rnf180Q3U827 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm45257-201ENSMUST00000210301 3998 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm13122-201ENSMUST00000118380 453 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm25280-201ENSMUST00000157269 101 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm16584-201ENSMUST00000159267 189 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm16232-201ENSMUST00000162856 167 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm17062-201ENSMUST00000166987 461 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm23047-201ENSMUST00000177661 94 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm24264-201ENSMUST00000179835 94 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm46138-201ENSMUST00000215294 426 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm26447-201ENSMUST00000082448 129 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rnf180Q3U827 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.01□□□□□ -1.77
Rnf180Q3U827 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Rnf180Q3U827 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Rnf180Q3U827 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4□□□□□ -1.77
Rnf180Q3U827 Gm24122-201ENSMUST00000104107 132 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC4□□□□□ -1.77
Rnf180Q3U827 Gm26101-201ENSMUST00000157246 105 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm23120-201ENSMUST00000157654 287 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm9830-201ENSMUST00000178509 357 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Mir195b-201ENSMUST00000184814 97 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm28257-201ENSMUST00000185244 463 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm29429-201ENSMUST00000187071 121 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm37338-201ENSMUST00000191986 127 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm37586-201ENSMUST00000193654 204 ntBASIC4□□□□□ -1.77
Rnf180Q3U827 Gm25820-202ENSMUST00000197479 128 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms