Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm22373-201ENSMUST00000104584 89 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm12719-201ENSMUST00000118859 241 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm14067-201ENSMUST00000119340 314 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm25805-201ENSMUST00000122788 108 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm22215-201ENSMUST00000157558 96 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm25424-201ENSMUST00000157612 58 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm24054-201ENSMUST00000158619 105 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm7241-201ENSMUST00000159853 357 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm23638-201ENSMUST00000175073 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm23158-201ENSMUST00000175076 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm22907-201ENSMUST00000175198 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm22625-201ENSMUST00000175382 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm22875-201ENSMUST00000175449 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm25197-201ENSMUST00000175516 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm27857-201ENSMUST00000176930 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm26268-201ENSMUST00000177685 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm23681-201ENSMUST00000178821 126 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Trbv6-201ENSMUST00000193743 276 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm44932-201ENSMUST00000206799 121 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm9616-201ENSMUST00000221154 781 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm23464-201ENSMUST00000083145 147 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm23099-201ENSMUST00000083454 139 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm25651-201ENSMUST00000083782 119 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd9P28357 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Hoxd9P28357 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.16□□□□□ -1.74
Hoxd9P28357 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.15□□□□□ -1.74
Hoxd9P28357 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Hoxd9P28357 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.15□□□□□ -1.74
Hoxd9P28357 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.15□□□□□ -1.74
Hoxd9P28357 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm22033-201ENSMUST00000116947 90 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm24141-201ENSMUST00000122776 115 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm22453-201ENSMUST00000122801 318 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm25913-201ENSMUST00000157617 135 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Hoxd9P28357 Mir8106-201ENSMUST00000184520 139 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Hoxd9P28357 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Hoxd9P28357 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.15□□□□□ -1.75
Hoxd9P28357 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Hoxd9P28357 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Hoxd9P28357 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd9P28357 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm24276-201ENSMUST00000102181 110 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm11432-201ENSMUST00000117334 231 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm25980-201ENSMUST00000157176 218 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm24916-201ENSMUST00000157287 79 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm22225-201ENSMUST00000157358 278 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm25220-201ENSMUST00000157546 95 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm25264-201ENSMUST00000158519 117 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Mir6933-201ENSMUST00000184982 81 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm29704-201ENSMUST00000196011 253 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm44871-201ENSMUST00000207821 497 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm23042-201ENSMUST00000083866 101 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Gm25257-201ENSMUST00000083907 110 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd9P28357 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Hoxd9P28357 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.14□□□□□ -1.75
Hoxd9P28357 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd9P28357 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Hoxd9P28357 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Hoxd9P28357 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Hoxd9P28357 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd9P28357 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd9P28357 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd9P28357 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd9P28357 Mir1298-201ENSMUST00000116681 98 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Gm14626-201ENSMUST00000117619 216 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Gm13249-201ENSMUST00000177803 345 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd9P28357 Gm13144-201ENSMUST00000179385 345 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Gm27611-201ENSMUST00000184690 108 ntBASIC4.13□□□□□ -1.75
Hoxd9P28357 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms