Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn8aQ9WTU3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn8aQ9WTU3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn8aQ9WTU3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn8aQ9WTU3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Scn8aQ9WTU3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scn8aQ9WTU3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn8aQ9WTU3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms