Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col13a1Q9R1N9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Gm27742-201ENSMUST00000184667 60 ntBASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col13a1Q9R1N9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Col13a1Q9R1N9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col13a1Q9R1N9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Gm6623-201ENSMUST00000173570 544 ntBASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col13a1Q9R1N9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms