Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubb3Q9ERD7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tubb3Q9ERD7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tubb3Q9ERD7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Dancr-204ENSMUST00000132389 2347 ntBASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Tubb3Q9ERD7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tubb3Q9ERD7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tubb3Q9ERD7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tubb3Q9ERD7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Tubb3Q9ERD7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tubb3Q9ERD7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubb3Q9ERD7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubb3Q9ERD7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubb3Q9ERD7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.94■□□□□ 0.3
Tubb3Q9ERD7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms