Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Nkx2-4Q9EQM3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Gm11779-201ENSMUST00000118541 368 ntBASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.53■□□□□ 0.4
Nkx2-4Q9EQM3 Fst-202ENSMUST00000223640 2612 ntBASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Gm6736-201ENSMUST00000166583 948 ntBASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Gm43575-201ENSMUST00000196420 516 ntBASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx2-4Q9EQM3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nkx2-4Q9EQM3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-4Q9EQM3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-4Q9EQM3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-4Q9EQM3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx2-4Q9EQM3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-4Q9EQM3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-4Q9EQM3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Gm7063-201ENSMUST00000186840 981 ntBASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms