Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssr3Q9DCF9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ssr3Q9DCF9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssr3Q9DCF9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ssr3Q9DCF9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ssr3Q9DCF9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ssr3Q9DCF9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Mir8112-201ENSMUST00000184382 131 ntBASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ssr3Q9DCF9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Gm40848-201ENSMUST00000221998 324 ntBASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr3Q9DCF9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr3Q9DCF9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr3Q9DCF9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr3Q9DCF9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr3Q9DCF9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Gm13534-201ENSMUST00000121169 513 ntBASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ssr3Q9DCF9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms