Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdc40Q9DC48 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdc40Q9DC48 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Gm13559-201ENSMUST00000120476 863 ntBASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Gm7889-201ENSMUST00000185591 958 ntBASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cdc40Q9DC48 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Gm10517-202ENSMUST00000192970 758 ntBASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdc40Q9DC48 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.86■□□□□ 0.13
Cdc40Q9DC48 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms