Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Mzt1-203ENSMUST00000227948 952 ntBASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rrp8Q9DB85 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.73■□□□□ 0.27
Rrp8Q9DB85 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Olfr129-201ENSMUST00000122318 993 ntBASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rrp8Q9DB85 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rrp8Q9DB85 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms