Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3l1Q9D9H3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Mbd3l1Q9D9H3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Mbd3l1Q9D9H3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Mbd3l1Q9D9H3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.83□□□□□ -0.03
Mbd3l1Q9D9H3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mbd3l1Q9D9H3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Gm45444-201ENSMUST00000211394 898 ntBASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Gm40881-201ENSMUST00000223397 166 ntBASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Mbd3l1Q9D9H3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mbd3l1Q9D9H3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms