Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps33aQ9D2N9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps33aQ9D2N9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps33aQ9D2N9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps33aQ9D2N9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps33aQ9D2N9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps33aQ9D2N9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps33aQ9D2N9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps33aQ9D2N9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps33aQ9D2N9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps33aQ9D2N9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps33aQ9D2N9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms