Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim42Q9D2H5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Gm13216-201ENSMUST00000117145 591 ntBASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim42Q9D2H5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim42Q9D2H5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim42Q9D2H5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim42Q9D2H5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim42Q9D2H5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim42Q9D2H5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim42Q9D2H5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms