Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim13Q9CYB0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim13Q9CYB0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim13Q9CYB0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Gm29791-202ENSMUST00000207888 369 ntBASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Gm7514-201ENSMUST00000209475 934 ntBASIC15.85■□□□□ 0.13
Trim13Q9CYB0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim13Q9CYB0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Haglr-201ENSMUST00000100000 2085 ntBASIC15.84■□□□□ 0.13
Trim13Q9CYB0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim13Q9CYB0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim13Q9CYB0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Gm10033-202ENSMUST00000211874 928 ntBASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim13Q9CYB0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Gm38285-201ENSMUST00000192928 922 ntBASIC15.82■□□□□ 0.12
Trim13Q9CYB0 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim13Q9CYB0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim13Q9CYB0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms