Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap3Q99LM2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdk5rap3Q99LM2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap3Q99LM2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdk5rap3Q99LM2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdk5rap3Q99LM2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Cdk5rap3Q99LM2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Cdk5rap3Q99LM2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap3Q99LM2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdk5rap3Q99LM2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap3Q99LM2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms