Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RtcbQ99LF4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.11■□□□□ 0.97
RtcbQ99LF4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RtcbQ99LF4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.1■□□□□ 0.97
RtcbQ99LF4 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.1■□□□□ 0.97
RtcbQ99LF4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RtcbQ99LF4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Rprl3-201ENSMUST00000157400 290 ntBASIC21.09■□□□□ 0.97
RtcbQ99LF4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Gm6376-201ENSMUST00000209407 580 ntBASIC21.09■□□□□ 0.97
RtcbQ99LF4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
RtcbQ99LF4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RtcbQ99LF4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.08■□□□□ 0.97
RtcbQ99LF4 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.08■□□□□ 0.97
RtcbQ99LF4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RtcbQ99LF4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RtcbQ99LF4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RtcbQ99LF4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.08■□□□□ 0.96
RtcbQ99LF4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RtcbQ99LF4 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.08■□□□□ 0.96
RtcbQ99LF4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RtcbQ99LF4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Gm13312-201ENSMUST00000119631 718 ntBASIC21.07■□□□□ 0.96
RtcbQ99LF4 Gm7862-201ENSMUST00000121461 292 ntBASIC21.07■□□□□ 0.96
RtcbQ99LF4 Gm1401-201ENSMUST00000122048 772 ntBASIC21.07■□□□□ 0.96
RtcbQ99LF4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Gm29707-201ENSMUST00000196325 491 ntBASIC21.07■□□□□ 0.96
RtcbQ99LF4 Gm6296-201ENSMUST00000222599 943 ntBASIC21.07■□□□□ 0.96
RtcbQ99LF4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RtcbQ99LF4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.06■□□□□ 0.96
RtcbQ99LF4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RtcbQ99LF4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.06■□□□□ 0.96
RtcbQ99LF4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.06■□□□□ 0.96
RtcbQ99LF4 Gm44450-201ENSMUST00000199528 114 ntBASIC21.06■□□□□ 0.96
RtcbQ99LF4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RtcbQ99LF4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms