Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Gm28659-201ENSMUST00000188013 759 ntBASIC19.7■□□□□ 0.74
Rfc4Q99J62 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfc4Q99J62 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Idnk-204ENSMUST00000226010 1898 ntBASIC19.69■□□□□ 0.74
Rfc4Q99J62 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.69■□□□□ 0.74
Rfc4Q99J62 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfc4Q99J62 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.68■□□□□ 0.74
Rfc4Q99J62 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfc4Q99J62 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.67■□□□□ 0.74
Rfc4Q99J62 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm15794-201ENSMUST00000120182 631 ntBASIC19.67■□□□□ 0.74
Rfc4Q99J62 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Mir8112-201ENSMUST00000184382 131 ntBASIC19.67■□□□□ 0.74
Rfc4Q99J62 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.67■□□□□ 0.74
Rfc4Q99J62 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfc4Q99J62 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Gm6443-201ENSMUST00000203599 874 ntBASIC19.66■□□□□ 0.74
Rfc4Q99J62 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfc4Q99J62 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Gm43514-201ENSMUST00000198852 424 ntBASIC19.65■□□□□ 0.74
Rfc4Q99J62 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Rarb-207ENSMUST00000225921 2756 ntBASIC19.65■□□□□ 0.74
Rfc4Q99J62 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfc4Q99J62 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfc4Q99J62 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Rfc4Q99J62 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Rfc4Q99J62 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfc4Q99J62 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rfc4Q99J62 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfc4Q99J62 Gm5864-201ENSMUST00000202263 970 ntBASIC19.64■□□□□ 0.73
Rfc4Q99J62 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc4Q99J62 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rfc4Q99J62 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc4Q99J62 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc4Q99J62 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfc4Q99J62 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc4Q99J62 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms