Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx39aQ8VDW0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx39aQ8VDW0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx39aQ8VDW0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx39aQ8VDW0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Gm29518-201ENSMUST00000190858 372 ntBASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx39aQ8VDW0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Ank2-226ENSMUST00000189368 339 ntBASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Gm17808-201ENSMUST00000200859 894 ntBASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx39aQ8VDW0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.97■□□□□ 0.63
Ddx39aQ8VDW0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx39aQ8VDW0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms