Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Gm18032-201ENSMUST00000222541 538 ntBASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ndc1Q8VCB1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Idnk-204ENSMUST00000226010 1898 ntBASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ndc1Q8VCB1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Gm8969-201ENSMUST00000199694 526 ntBASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ndc1Q8VCB1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Gm37025-201ENSMUST00000195159 829 ntBASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ndc1Q8VCB1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm16061-201ENSMUST00000122167 857 ntBASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm23634-201ENSMUST00000175071 91 ntBASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms