Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top1mtQ8R4U6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.45■□□□□ 0.87
Top1mtQ8R4U6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Odf3b-204ENSMUST00000227834 930 ntBASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top1mtQ8R4U6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Mir5122-201ENSMUST00000175004 89 ntBASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top1mtQ8R4U6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Gm3375-201ENSMUST00000203929 796 ntBASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Top1mtQ8R4U6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.42■□□□□ 0.86
Top1mtQ8R4U6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Top1mtQ8R4U6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms