Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Swi5Q8K3D3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Gm45417-201ENSMUST00000209533 758 ntBASIC15.6■□□□□ 0.09
Swi5Q8K3D3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Swi5Q8K3D3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Swi5Q8K3D3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Swi5Q8K3D3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Swi5Q8K3D3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Swi5Q8K3D3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Swi5Q8K3D3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.57■□□□□ 0.08
Swi5Q8K3D3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms