Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Rfwd3Q8CIK8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfwd3Q8CIK8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rfwd3Q8CIK8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfwd3Q8CIK8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfwd3Q8CIK8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfwd3Q8CIK8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfwd3Q8CIK8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gm12085-201ENSMUST00000119263 940 ntBASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gm37055-201ENSMUST00000191866 133 ntBASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gm38027-201ENSMUST00000192315 235 ntBASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfwd3Q8CIK8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfwd3Q8CIK8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms